I messed up my git repo, so here I try again. Thanks for the patience. Since emacs and snakemake is all I use, you will probably have to brace yourself for more PRs. > Hmm, but this is limited to creating the graph for the first rule ofthe Snakefile, right? Yes, I do not think it is possible to create a graph for anything but the all rule. But if it is, I have never done it and do not know how to do it. I do not yet understand the compile-code either. > I'd prefer to have this as a customizable variable, as is done with snakemake-program. I have made `snakemake-graph-program` a defcustom. But I do not know of other pieces of software that can do the same thing though. You can view, comment on, or merge this pull request online at: https://github.com/kyleam/snakemake-mode/pull/9 -- Commit Summary -- * Graph and show workflow in emacs. -- File Changes -- M snakemake.el (45) -- Patch Links -- https://github.com/kyleam/snakemake-mode/pull/9.patch https://github.com/kyleam/snakemake-mode/pull/9.diff --- You are receiving this because you are subscribed to this thread. Reply to this email directly or view it on GitHub: https://github.com/kyleam/snakemake-mode/pull/9