It seems harder to extend yapf than to implement my hackish proposal.

But I guess I could create my own Python script which 1) does the transformation, 2) calls yapf and then 3) translates the code into snakemake again.

I should have been clearer about why I posted this here. I was wondering about whether you might accept a PR for such a formatter if I write it. I doubt the yapf projects would be interested in PRs to support a relatively obscure DSL.

Anyways, will be sometime in the future so that I can use and tweak it myself for a while.

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